CDS

Accession Number TCMCG057C38923
gbkey CDS
Protein Id XP_018446134.1
Location join(3560643..3561002,3561239..3561264,3561369..3561455,3561540..3562292,3562367..3562427,3562522..3562569)
Gene LOC108817823
GeneID 108817823
Organism Raphanus sativus

Protein

Length 444aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018590632.1
Definition PREDICTED: chromo domain-containing protein LHP1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category B
Description Chromo domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11453        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0000791        [VIEW IN EMBL-EBI]
GO:0000792        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003933        [VIEW IN EMBL-EBI]
GO:0003935        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005720        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009648        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009825        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009910        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010048        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016810        [VIEW IN EMBL-EBI]
GO:0016814        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019238        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0035064        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0040030        [VIEW IN EMBL-EBI]
GO:0042393        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045857        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048573        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048581        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140030        [VIEW IN EMBL-EBI]
GO:0140034        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000242        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAAGGGGCAGCAGGAGGTGTTAAGAAGAAGACCCAGGTGGCCAACGACGCCGGCGAGGCGGAGACGACGGCGGTGGAAACATTCGGAGGAAGCGGGAAAAGAAGTGGAGACGGCGGCGGGTTTGGCAGTGACGACGGCGGAGGAGGAGGAGGAGAGTCAGTTCTTCGCGAGATGGGTGATGACAGGCGTACGGAGGATGAGGAAGAGGAAGAAGAAGAAGAAGACGACGACGAAGAAGAGGAGGAAGATGAAGAAGATGTAGGAGAAGGAGGAGGAGGAGGAAGGAAAGAGGAAAGGCCAAAGCTTGATGAAGGGTTTTTCGAAATCGAAGCTATTCGTCGTAAGAGAGTTCGTAAAGGAAAGGTCCAGTATCTAATTAAATGGCGTGGATGGCCAGAAACAGCCAACACATGGGAGCCTAAAGAGAATCTCCAGTCTATTGCTGATGTTATTGATGCATTTGAAGGAAGTTTGAAGCCAGGGAAGCCTGGAAGGAAGCCCGGAAGGAAGCGTAAACATCCTCCTACTTCTACTCCTCAGTTGAAGAAGAAGCAGCAGCAACGTTTAACATCTAATAATACATCGCATGATGCTTCTGAGAGATCCGACTCTTTCACATCTCTTAACAACTCTACCCTTCCTACTAATAACAACATTCCTGGTGGTCCATTCGACAACCTCTGCAGTCTGCCAAAAGGAGATGGGGAAACTGCTTATGCAGCAGCCAACAACAACCAAGTTATTGAAGCTAACAGCAGGAGTTTAGTAGAGAAAGATTACGATCCGACGCTTAGCGAGCTGAGGGGACCAGTCATTAACAGTAACGGAGGAGGAGGAGAAGGTGGTGATAATGTGAGACCAAATGGCCTTCTCAAGGTTTATCCTAAGAACAGTGGGTTCATTGGTGCTAAGAGGAGGAAGTCTGGTTCTGTGAAAAGATTCAAACAAGACGCATCCACAAGTAACAACAACAACAAGAACCACACAACAGCAGGTACTGGTCAGAATGCAGGGACACAAGAGTTGGCTGAGTTAGACTCTTTTGGAGGAGTCGCGAGGATAGGGAATGAGTATCCTCCTGGTGTGTTGGAGAATGACAACAATCTCTCTCAGAAAAGCAAGATGGAGGAGCTGGACATTGCGAAGATCCTTAAACCGGTGAAGTTCTCTTCATCTGTCACAAACAATGTGCAAGACGTGTTGGTGACCTTTTTGGCTCTGAGGTCTGATGGGGAGGAAGTGATGGTAGACAACAGGTTTCTCAAGGCTCACAATCCTCATCTGCTGATTGAGTTCTACGAGCAACATCTCAAGTACAATCCGGAAAGATAA
Protein:  
MKGAAGGVKKKTQVANDAGEAETTAVETFGGSGKRSGDGGGFGSDDGGGGGGESVLREMGDDRRTEDEEEEEEEEDDDEEEEEDEEDVGEGGGGGRKEERPKLDEGFFEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPKENLQSIADVIDAFEGSLKPGKPGRKPGRKRKHPPTSTPQLKKKQQQRLTSNNTSHDASERSDSFTSLNNSTLPTNNNIPGGPFDNLCSLPKGDGETAYAAANNNQVIEANSRSLVEKDYDPTLSELRGPVINSNGGGGEGGDNVRPNGLLKVYPKNSGFIGAKRRKSGSVKRFKQDASTSNNNNKNHTTAGTGQNAGTQELAELDSFGGVARIGNEYPPGVLENDNNLSQKSKMEELDIAKILKPVKFSSSVTNNVQDVLVTFLALRSDGEEVMVDNRFLKAHNPHLLIEFYEQHLKYNPER